Organic
Chemistry This site is still functional but it is not maintained. The site has been replaced by http://murov.info/orgchemres.htm |
Launched 4/4/08, last update
1/6/21 |
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Tetrahedral structure at Alexander Graham Bell Museum, Nova Scotia |
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Kitten admiring model of nepatalactone (catnip) |
Newest entries are in red or indicated with a red asterisk.
For additional web sites by Murov, please visit: http://murov.info . Sites include chemistry related information as well as several recently posted Powerpoint pre-shows downloadable for use with audiences waiting for the beginning of a presentation ( http://murov.info/PPTPreshows.htm ), a climate change directory with editorial comments ( http://murov.info/climatechange.htm ), a selection of periodic tables and a periodic table directory ( http://murov.info/periodictables.htm ), a list of handy bookmarks (http://murov.info/handy.htm ), a Reaction-Map of Organic Chemistry (http://murov.info/Reaction-Map.htm ) and tables of solvent and compound data ( http://murov.info/orgsolvents.htm, http://murov.info/orgsolvents.htm )
Free downloadable
lab book for the college level organic chemistry course just posted 02/27/14.
Experiments and Exercises in Organic Chemistry: A Challenge Oriented
Approach - http://murov.info/orglab.htm
I. Properties of Organic
Compounds
A. Elements - Periodic Tables - WebElements - http://www.webelements.com/
http://murov.info/periodictables.htm
http://murov.info/pertabtrends.htm
http://murov.info/pertabtrends.pptx
Directory
of Periodic Tables -
https://www.meta-synthesis.com/webbook/35_pt/pt_database.php?Button=All
http://murov.info/periodictables.htm
Periodic table with history of elements -
http://elements.vanderkrogt.net/
Chronology of the development of the
periodic table -
http://murov.info/timelines.htm
History of elements and periodic table -
http://www.chem.unt.edu/~jimm/REDISCOVERY%207-09-2018/
Properties of the elements -
http://www.knowledgedoor.com/
B. Compounds - Properties
1.
Tabulation
Murov -
http://murov.info/orgcmpds.htm
WolframAlpha - http://www.wolframalpha.com/
Chemical Book -
http://www.chemicalbook.com/
Chemidplus - https://chem.nlm.nih.gov/chemidplus/
https://chem.nlm.nih.gov/chemidplus/chemidlite.jsp
Stenutz
-
http://www.stenutz.eu/chem/search.php
ChemBK -
https://www.chembk.com/en
Knovel Critical Tables (If using Explorer, it must be newest version)
(21824 compounds in sortable tables) - login required -
initial registration or login:
https://app.knovel.com/web/register.v
already registered login:
click on or copy and paste:
https://app.knovel.com/web/view/itable/show.v/rcid:kpKCTE000X/cid:kt002VLXT1/viewerType:itble/
To filter the listing, click on the triangle
following the desirred parameter, select filter and then enter the limits of the
desired parameter (<, > or =) and hit enter.
(7274 Compounds in sortable tables) -
https://app.knovel.com/web/view/itable/show.v/rcid:kpKS000009/cid:kt00395F16/viewerType:itble/
ChemSynthesis -
https://www.chemsynthesis.com/
Kaye and Laby - organic -https://web.archive.org/web/20190519191800/http://www.kayelaby.npl.co.uk/chemistry/3_3/3_3.html
inorganic -
https://web.archive.org/web/20190502165701/http://www.kayelaby.npl.co.uk/chemistry/3_2/3_2.html
Chemland 21 - http://www.chemicalland21.com/listaz01.htm
Chemblink http://www.chemblink.com/
ChemSRC - https://www.chemsrc.com/en/
LookChem - http://www.lookchem.com/
Human Metabolome
Database -
http://www.hmdb.ca/
EPA -
https://chemview.epa.gov/chemview
https://www.epa.gov/saferchoice
MolBase -
http://www.molbase.com/
PubChem - https://pubchem.ncbi.nlm.nih.gov/
Osha -
https://www.osha.gov/chemicaldata/
Shriner,
et.al, Systematic Identification of Organic Compounds, manual for
identifying organic compounds especially with the use of derivatives,
includes tables of common organic compounds with melting or boiling points and
melting points of derivatives in tables at back.
https://celqusb.files.wordpress.com/2018/04/kupdf-com_systematic-identification-of-organic-compounds-wiley-shrinerhermannmorrillcurtinfuson.pdf
2.
Tabulation +
MSDS
Acros,
Fisher
-
https://www.fishersci.com/us/en/brands/I9C8LQ1I/acros-organics.html
Alpha Chemical
-
https://www.alfa.com/en/chemicals/
ChemExper Chem. Directory
- http://www.chemexper.com/
Chemidplus -
https://chem.nlm.nih.gov/chemidplus/
https://chem.nlm.nih.gov/chemidplus/chemidlite.jsp
Chemindex - http://ccinfoweb.ccohs.ca/chemindex/search.html
Chemspider - http://www.chemspider.com/
http://www.chemspider.com/SimpleSearch.aspx
EMD Chemicals -
http://www.emdmillipore.com/US/en/documents/Z.qb.qB.tecAAAFDDJUsznLq,nav
TCI America - http://www.tcichemicals.com/en/us/support-download/brochure/catalog.html
Wikipedia -
https://en.wikipedia.org/wiki/Dictionary_of_chemical_formulas
https://en.wikipedia.org/wiki/List_of_inorganic_compounds
Chemical Book - http://www.chemicalbook.com/
3.
MSDS or SDS
Aldrich, Sigma,-
https://www.sigmaaldrich.com/united-states.html
MSDS Solutions - http://www.msds.com/
Vermont Safety Information Resources, Inc. - http://hazard.com/msds/
MSDSprovider - http://www.msdsprovider.com/
MSDS online - https://www.msdsonline.com/
MSDS digital -
https://www.msdsdigital.com/msds-database
Fisher -
https://www.fishersci.com/us/en/catalog/search/sdshome.html
EHSO - http://ehso.com/msds-sds.php
C. Search for Compounds from
Properties
Aldrich -
http://www.sigmaaldrich.com/catalog/search/substructure/OldSubstructureSearchPage
accepts - formula, structure,
molecular mass, mp, bp, density
ChemExper Chem Directory - http://www.chemexper.com/advanced_search.shtml
accepts - formula,
structure, molecular mass, bp, mp, refractive index, density, ir,
nmr
ChemNet Data Base http://poc.chemnetbase.com/faces/chemical/ChemicalSearch.xhtml
accepts formula, melting point, boiling point
Chemspider -
http://www.chemspider.com/FullSearch.aspx
accepts - formula, molecular mass
Melting point and
molecular mass search:
https://chem.nlm.nih.gov/chemidplus/
accepts - formula, mp,
bp
Murov - http://murov.info/orgcmpds.htm
search by molecular mass, bp, mp, density, refractiive index
Organic Chemistry Data Base - http://www.colby.edu/chemistry/cmp/cmp.html
accepts - formula, molecular
mass, mp, bp, density, refractive index, ir, ms
NIMC site -
http://sdbs.db.aist.go.jp/sdbs/cgi-bin/cre_index.cgi?lang=eng
accepts - formula, molecular mass,
ir, nmr, ms
Polymers -
http://www.matweb.com/search/PropertySearch.aspx
Knovel Critical Tables (If using Explorer, it must be newest version)
(21824 compounds in sortable tables) - login required -
initial registration or login:
https://app.knovel.com/web/register.v
already registered login:
click on or copy and paste:
https://app.knovel.com/web/view/itable/show.v/rcid:kpKCTE000X/cid:kt002VLXT1/viewerType:itble/
To filter the listing, click on the triangle
following the desirred parameter, select filter and then enter the limits of the
desired parameter (<, > or =) and hit enter.
(7274 Compounds in sortable tables) -
https://app.knovel.com/web/view/itable/show.v/rcid:kpKS000009/cid:kt00395F16/viewerType:itble/
D. Solvent Properties
http://murov.info/orgsolvents.htm
http://murov.info/orgsolvsort.htm
https://www.organicdivision.org/ama/orig/organic_solvents.html
http://www.stenutz.eu/chem/
http://www.wiredchemist.com/chemistry/data/physical_character_solvents.html
https://www2.chemistry.msu.edu/faculty/reusch/OrgPage/solvent.htm
https://www.sigmaaldrich.com/chemistry/stockroom-reagents/learning-center/technical-library/solvent-properties.html
https://en.wikipedia.org/wiki/Solvent
https://www.ch.ic.ac.uk/williams/Solvent%20properties.pdf
Knovel Critical Tables (If using Explorer, it must be newest version)
(21824 compounds in sortable tables) - login required -
initial registration or login:
https://app.knovel.com/web/register.v
already registered login:
click on or copy and paste:
https://app.knovel.com/web/view/itable/show.v/rcid:kpKCTE000X/cid:kt002VLY34/viewerType:itble/
To filter the listing, click on the triangle
following the desirred parameter, select filter and then enter the limits of the
desired parameter (<, > or =) and hit enter.
ChemSynthesis -
https://www.chemsynthesis.com/
nmr of deuterated
solvents
http://www.wiredchemist.com/chemistry/data/common_nmr_solvents.html
http://www2.chem.umd.edu/nmr/reference/isotope_solvent.pdf
E. Chemical Education Journals
J. Chem. Ed. - http://pubs.acs.org/journal/jceda8
http://pubs.acs.org/loi/jceda8
Education in Chemistry - http://www.rsc.org/eic/
http://www.rsc.org/eic/e-magazine
Chem13 News -
https://uwaterloo.ca/chem13-news-magazine/
F. Chemistry Directory - http://murov.info/webercises.htm
G. Organic Chemistry Directory -
https://organicchemistrydata.org/
http://murov.info/orgchem.htm
H. Reaction-Map of Organic Chemistry - http://murov.info/Reaction-Map.htm
Exercise based on the above -
http://murov.info/orgchemrxnexe.htm
I. Literature search -
http://www.researchgate.net/
J. Spectra
1. IR - Liquid or Solution
NIMC site - http://sdbs.db.aist.go.jp/sdbs/cgi-bin/cre_index.cgi
NIST site - http://webbook.nist.gov/chemistry/
PSLC - http://pslc.uwsp.edu/
Aldrich, Sigma -
https://www.sigmaaldrich.com/united-states.html
Gasmet -
https://www.gasmet.com/de/products/tools/spectrum-library/
2. IR - Gas Phase
NIST - http://webbook.nist.gov/chemistry/
Gasmet -
https://www.gasmet.com/de/products/tools/spectrum-library/
3.. HNMR - Experimental
NIMC site - http://sdbs.db.aist.go.jp/sdbs/cgi-bin/cre_index.cgi?lang=eng
PSLC - http://pslc.uwsp.edu/
Aldrich, Sigma -
https://www.sigmaaldrich.com/united-states.html
Solvents -
http://www2.chem.umd.edu/nmr/reference/isotope_solvent.pdf
Deuterated solvents - http://www.wiredchemist.com/chemistry/data/common_nmr_solvents.html
bioorganics - http://mmcd.nmrfam.wisc.edu/mmcdbrowse.html
4. HNMR - Calculated
ChemExper Chem Directory - http://www.chemexper.com/
nmrdb - http://www.nmrdb.org/
5. 13CNMR - Experimental
NIMC site - http://sdbs.db.aist.go.jp/sdbs/cgi-bin/cre_index.cgi?lang=eng
PSLC - http://pslc.uwsp.edu/
6. Mass
NIMC site - http://sdbs.db.aist.go.jp/sdbs/cgi-bin/cre_index.cgi?lang=eng
PSLC - http://pslc.uwsp.edu/
Pherobase - http://www.pherobase.com/database/compound/compounds-index.php
human metabolites - http://www.hmdb.ca/
7. UV-Vis
NIST site - http://webbook.nist.gov/chemistry/
OMLC - http://omlc.org/spectra/PhotochemCAD/html/alpha.html
8. Bibliography - http://library.buffalo.edu/libraries/asl/guides/spectra.html
9. Polymer spectra - http://pslc.uwsp.edu/
10. Photophysical properties of organic compounds - http://murov.info/photophys.htm
11. Fee based KnowItAll spectral database - https://sciencesolutions.wiley.com/knowitall-u/
1.
Acid Base Indicator properties
https://www.compoundchem.com/2014/04/04/the-colours-chemistry-of-ph-indicators/
https://en.wikipedia.org/wiki/PH_indicator
https://www.sciencecompany.com/ph_indicator_ranges.aspx
https://www.thoughtco.com/edible-ph-indicators-color-chart-603655
https://www.techknow.org.uk/wiki/index.php?title=PH
http://foundoutaboutchemistry.blogspot.com/2016/05/acid-base-indicator-charts.html
2. Electronegativities
http://www.meta-synthesis.com/webbook/36_eneg/electroneg.html
http://www.knowledgedoor.com/
https://periodictable.me/electronegativity-chart/
3. pKa values
https://www2.chem.wisc.edu/areas/reich/pkatable/index.htm
http://www.wiredchemist.com/chemistry/data/acid_constants.html
http://www.wiredchemist.com/chemistry/data/base_constants.html
http://www.zirchrom.com/organic.htm
http://ccc.chem.pitt.edu/wipf/MechOMs/evans_pKa_table.pdf
4. Hammett constants
http://www.wiredchemist.com/chemistry/data/hammett_sigma_constants.html
http://old.iupac.org/publications/pac/1997/pdf/6912x2497.pdf
L. Toxicology and Hazards (also check MSDS sites
above)
ATSDR - http://www.atsdr.cdc.gov/substances/index.asp
NIOSH - http://www.cdc.gov/niosh/npg/npgsyn-a.html
Toxnet - http://www.nlm.nih.gov/pubs/factsheets/toxnetfs.html
PubChem - http://pubchem.ncbi.nlm.nih.gov/
Toxnet -
https://www.nlm.nih.gov/toxnet/index.html
Toxin database - http://www.t3db.ca/
http://www.t3db.ca/toxins
Cancer
screening
NCI - http://nci.cambridgesoft.com/
http://www.cdc.gov/niosh/npg/nengapdx.html
Other concerns of chemicals
Household and Commonly Encountered Chemicals -
https://my.clevelandclinic.org/health/articles/11397-household-chemical-products-and-their-health-risk
https://www.walkuplawoffice.com/wrongful-death/toxic-household-products/
Food Additives -
http://www.gpo.gov/fdsys/pkg/CFR-2003-title21-vol1/content-detail.html
Structural Database of Allergenic Proteins
-
http://www.allermatch.org/database.html
http://fermi.utmb.edu/SDAP/
Drug Properties and Structure for Drug Design: Links to Data Bases
-
http://www.drugbank.ca/
II. Synthesis and
Reactions
* http://www.name-reaction.com/
Organic Synthesis -
http://www.orgsyn.org/ (requires
plug-in)
http://www.sigmaaldrich.com/chemistry/chemical-synthesis.html
http://www.monomerchem.com/display4.html
http://www.chemthes.com/rxn-type.php
http://cssp.chemspider.com/
http://www.organic-chemistry.org/reactions.htm
http://www.rsc.org/learn-chemistry/resources/synthesis-explorer/
http://www.chem.wisc.edu/areas/reich/syntheses/syntheses.htm
http://chemistrybydesign.oia.arizona.edu/
http://www.synarchive.com/
Named Organic Reactions - http://www.careerchem.com/NAMED/Homepage.html
Reaction Map - http://www.jce.divched.org/Journal/Issues/2007/Jul/abs1224.html
http://murov.info/rxnmaponline.pdf
For an exercise based on the
rxn-map, please visit:
http://murov.info/orgchemrxnexe.htm
III. Molecular Models
A. Drawing Programs and Molecular
Visualization (possibly free download and some templates
included)
Chem Sketch - http://www.acdlabs.com/resources/freeware/chemsketch/
Chemaxon -
https://chemaxon.com/products/marvin-js
Jmol - http://jmol.sourceforge.net/
B. Collections
http://www.umass.edu/microbio/rasmol/gallery.htm
http://www.molecularmodels.ca/molecule/molecule_index.html
C. Molecular Modeling
Information and Links
http://confchem.ccce.divched.org/2015SpringConfChem
http://www.nyu.edu/pages/mathmol/
http://www.umass.edu/microbio/rasmol/
visualization of organic reaction mechanisms -
http://www.chemtube3d.com/
IV. Organic Chemistry
Directories
http://www.organicworldwide.net/
https://organicchemistrydata.org/
http://murov.info/orgchemres.htm
V. Educational Sites and Resources
A. Chemical Education Journals
J. Chem.
Ed. - http://pubs.acs.org/journal/jceda8
http://pubs.acs.org/loi/jceda8
Education
in Chemistry - http://www.rsc.org/eic/
http://www.rsc.org/eic/e-magazine
Chem13 News - https://uwaterloo.ca/chem13-news-magazine/
B. Concepts, Virtual
Textbooks
https://www2.chemistry.msu.edu/faculty/reusch/VirtTxtJml/intro1.htm https://www2.chemistry.msu.edu/faculty/reusch/VirtTxtJml/intro1a.htm
https://chem.libretexts.org/Bookshelves/Organic_Chemistry/Book%3A_Virtual_Textbook_of_OChem_(Reusch)_UNDER_CONSTRUCTION
http://www.ochem.com
http://www.chemthes.com/rxn-type.php
http://www.chemguide.co.uk/orgpropsmenu.html
http://chemwiki.ucdavis.edu/Organic_Chemistry
http://en.wikibooks.org/wiki/Organic_Chemistry
http://www.stolaf.edu/depts/chemistry/courses/toolkits/247/
organic
lab book - http://murov.info/orglab.htm
C.
Spectroscopy
1. Concepts,
Tutorials and/or Exercises - ir, nmr, mass spectra and/or
uv-vis
http://www3.nd.edu/~smithgrp/structure/workbook.html
http://teaching.shu.ac.uk/hwb/chemistry/tutorials/
http://www.colby.edu/chemistry/NMR/NMR.html
2. Concepts and Exercises -
nmr
http://www.ch.ic.ac.uk/local/organic/nmr.html
http://users.wfu.edu/ylwong/chem/nmr/h1/
http://www.science-and-fun.de/1hbuch/english/
designing nmr exercises
http://mylims.epfl.ch/lims/default/sample/elearning/
3. Concepts and
Exercises - ir
http://www.colby.edu/chemistry/JCAMP/IRHelper.html
4. Concepts - mass
spectra
http://murov.info/ms.htm
http://en.wikipedia.org/wiki/Mass_spectrometry
http://en.wikipedia.org/wiki/Mass_spectrum_analysis
D. Chromatography
http://en.wikipedia.org/wiki/Chromatography
F. Concepts,
Tutorials
http://www.colby.edu/chemistry/OChem/OChemHome241.HTML
http://www.chemguide.co.uk/index.html#top
http://www.stolaf.edu/depts/chemistry/courses/toolkits/247/
glossary
-
http://www.barcodesinc.com/articles/organic-chemistry-glossary.htm
nomenclature - http://www.acdlabs.com/iupac/nomenclature/
http://www.angelfire.com/bc2/OrgChem/
reaction mechanisms
-
http://www.chem.ox.ac.uk/vrchemistry/iom/
http://www.chemguide.co.uk/mechmenu.html
visualization of organic reaction
mechanisms -
http://www.polymer-search.com/covalent/science-teachers-polymer-education-guide.html
G. Exercises with some
tutorials
http://murov.info/orglab/exercises.htm
H. Laboratory Techniques
http://www.ochem.com/
http://library.sciencemadness.org/library/books/Research_Techniques_in_Organic_Chemistry.pdf
I. Laboratory
Experiments
http://murov.info/orglab.htm
http://faculty.chas.uni.edu/~manfredi/860-121/ORG
LAB MAN S08.pdf
https://www.bths.edu/ourpages/auto/2014/1/5/47316574/orgo-labs.pdf
http://www.unesco.org/science/doc/Organi_chem_220709_FINAL.pdf
http://www.ch.ic.ac.uk/GIC/organic_lab.html
J. Safety
http://web.centre.edu/labsafety/handbook.htm
http://nobel.scas.bcit.ca/debeck_pt/science/whmis/whmis_p1.htm
http://science.widener.edu/svb/cccenews/safety/
cleaning agents -
http://www.blackmoldremoval.com/chemistry-behind-cleaning/
K. Periodic
Table - Web Elements - http://www.webelements.com/
http://murov.info/periodictables.htm
http://www.martindalecenter.com/Reference_3_PerTables.html
http://www.thecatalyst.org/m03ptabl.html
L. Reaction Map of Organic
Chemistry
http://www.jce.divched.org/Journal/Issues/2007/Jul/abs1224.html
http://murov.info/Reaction-Map.htm
For and exercise based on the above, please visit:
http://murov.info/orgchemrxnexe.htm
M. History, Eminent
Chemists
http://www.nobelprize.org/nobel_prizes/chemistry/organic_chemistry.html
Cited
Chemists
http://careerchem.com/CAREER-INFO-ACADEMIC/top-cited.pdf
http://chemport.ipe.ac.cn/cgi-bin/chemport/getfiler.cgi?ID=SYio5Sx8jbXY1QuIXQy0zBqZkdlguJeOWYfdJK56VaUSd2Ftf1grFpEOWreDP2Ck&VER=E
http://scholar.google.com/intl/en/scholar/citations.html
VI. Searches - Keyword and
Journals
NEW - keep up on chemical literature.-
http://www.chembrows.com/website/
Keyword
Search
http://www.researchgate.net/
http://www.sciencedirect.com/
http://www.chemspider.com/
http://www.osti.gov/
Journal Search
http://www.ingentaconnect.com/
http://www.scienceresearch.com/scienceresearch/
http://citeseerx.ist.psu.edu/
http://www.deepdyve.com/
Fee search sites (Your site or library may have a
subscription)-
Chemical Abstracts
- http://www.cas.org/
Beilstein - http://en.wikipedia.org/wiki/Beilstein_database
Science Citation Index -
http://ip-science.thomsonreuters.com/cgi-bin/jrnlst/jloptions.cgi?PC=K
VII. Suppliers, Structure
Search
http://www.emolecules.com/
VIII.
Journals
J.
Chem. Ed. Index - http://pubs.acs.org/journal/jceda8
http://pubs.acs.org/loi/jceda8
http://www.abc.chemistry.bsu.by/current/fulltext.htm
http://doaj.org/
IX. Special
topics
A. Combinatorial Chemistry
and Cheminformatics
http://www.combinatorial.com/
http://infochim.u-strasbg.fr/CS3/program/material/Ertl.pdf
B. Coordination Compounds - http://www.chem.purdue.edu/gchelp/cchem/
C. Green
Chemistry
http://www2.epa.gov/green-chemistry
http://www.greener-industry.org/
http://www.uoregon.edu/~hutchlab/greenchem/
D. Microwave Synthesis
http://www.organic-chemistry.org/topics/microwave-synthesis.shtm
E. Nano Topics
F. Organometallics - http://www.ilpi.com/organomet/
H. Photosynthesis - http://www.life.illinois.edu/govindjee/photoweb/
J. Polymers
http://www.polymer-search.com/covalent/science-teachers-polymer-education-guide.html
http://agpa.uakron.edu/
http://pslc.ws/macrog/index.htm
http://matse1.matse.illinois.edu/polymers/polymers.html
Spectra
- http://pslc.uwsp.edu/
K. Smell and Olfaction
Including Databases
http://leffingwell.com/chirality/chirality.htm
http://flavornet.org/index.html
L. Sugars -
http://www2.chemistry.msu.edu/faculty/reusch/VirtTxtJml/carbhyd.htm
M. Smart phone apps -
http://www.rsc.org/chemistryworld/Issues/2010/May/MobileChemistryChemistryHandsFace.asp
Other websites by this author are available at: http://murov.info/
Organic chemistry web sites by this author include:
Properties of organic solvents and hotlinks to organic chemical property sites: http://murov.info/orgsolvents.htm
Properties of 1000 organic compounds: http://murov.info/orgcmpds.htm
Organic Chemistry Resources: http://murov.info/orgchemres.htm
Organic chemistry milestones: http://murov.info/organicmilestones.htm
Reaction-map of organic chemistry: http://murov.info/Reaction-Map.htm , http://murov.info/orgchemrxnexe.htm
Online organic laboratory text: http://murov.info/orglab.htm
Organic chemistry exercises (also included in organic laboratory text): http://murov.info/orglab/exercises.htm
Stats Meters site started 4/4/08, hit counter
restarted at zero on 07/27/12, bad links eliminated on 1/6/21 but a search
was not performed to replace them.